Developed by Naoki Sato
See
README
file for the upgrades 1.59.
Version 159.41. May 24, 2011.
SISEQ is being updated with various
powerful extensions. Version 1.24 is available as source code and binaries.
In this version, most commands are compatible with multiple sequence file,
either in the GenBank, EMBL, Swiss Prot or FASTA format. So, a mass conversion
of multiple sequence file to protein or complementary sequence is now possible,
which might be useful in making multiple alignment of both nucleic acid
and amino acid sequences. Consult appropriate 'README' file and 'About'
files for details. Help command of the siseq program is also available
to see new commands and enhancements. Now, a script file can be processed
automatically in the SISEQ program. Some shell commands such as copy, remove
etc. as well as setting some global variables are available within the
siseq program. A sample script is provided in the test directory as 'siseq.cf.bak'.
Use 'siseq.cf' as a default script file name. If siseq program is invoked
in a directory where 'siseq.cf' is present, siseq automatically executes
commands in the script. To avoid this, rename 'siseq.cf'. .
A single application "siseq.FAT" and "siseq.exe"
provides interface to all commands of the SISEQ package in Mac and Win
versions, respectively.
Sato, N. (2000)
Manipulation of multiple sequence and large
database files for common platforms.
Bioinformatics 16, 180-181.
SISEQ package for Mac (version 1.59.4, FAT)
SISEQ package for Windows or DOS (version 1.59.4)
SISEQ
Tcl/Tk script: A simple GUI (guided user interface)
for the SISEQ tools. Updated for SISEQ 1.2.3.
Requirements: the SISEQ package, Tcl7.6/Tk4.2, Tcl/Tk8.0, Tcl/Tk8.1
or Tcl/Tk8.2.
This script is now incorporated in the SISEQ package.
Read a short manual for About_siseq.tk.
SISEQ package manual in Japanese
SISEQ package HTML manual in Japanese
SISEQ package manual in English
SISEQ manual (Word doc) in Japanese
The of the SISEQ package is available
without a charge to academic
community. Get a copy from
HERE